issues with node.js

MTR

My first issue is about permission :

[MTR@s2]:<~/domains/directus.mtr.serv00.net/public_nodejs>$ npx directus start
sh: directus: Permission denied

I did enable Binexec option. This seems to be the only log generated.

The second issue is with "npm install". node-pre-gyp fails.
Here my package.json :

{
  "name": "directus_test",
  "version": "1.0.0",
  "description": "",
  "main": "index.js",
  "scripts": {
    "start": "directus start",
    "build": "npx directus bootstrap",
    "test": "echo \"Error: no test specified\" && exit 1"
  },
  "keywords": [],
  "author": "",
  "license": "ISC",
  "dependencies": {
    "directus": "^10.9.3",
    "mysql": "^2.18.1"
  }
}

npm install log error :

[MTR@s2]:<~/domains/directus.mtr.serv00.net/public_nodejs>$ npm install
npm WARN ERESOLVE overriding peer dependency
npm WARN While resolving: rollup-plugin-styles@4.0.0
npm WARN Found: rollup@3.29.4
npm WARN node_modules/@directus/extensions-sdk/node_modules/rollup
npm WARN   rollup@"3.29.4" from @directus/extensions-sdk@10.3.4
npm WARN   node_modules/@directus/extensions-sdk
npm WARN     @directus/extensions-sdk@"10.3.4" from @directus/api@17.1.0
npm WARN     node_modules/@directus/api
npm WARN   1 more (rollup-plugin-esbuild)
npm WARN 
npm WARN Could not resolve dependency:
npm WARN peer rollup@"^2.63.0" from rollup-plugin-styles@4.0.0
npm WARN node_modules/@directus/extensions-sdk/node_modules/rollup-plugin-styles
npm WARN   rollup-plugin-styles@"4.0.0" from @directus/extensions-sdk@10.3.4
npm WARN   node_modules/@directus/extensions-sdk
npm WARN
npm WARN Conflicting peer dependency: rollup@2.79.1
npm WARN node_modules/rollup
npm WARN   peer rollup@"^2.63.0" from rollup-plugin-styles@4.0.0
npm WARN   node_modules/@directus/extensions-sdk/node_modules/rollup-plugin-styles
npm WARN     rollup-plugin-styles@"4.0.0" from @directus/extensions-sdk@10.3.4
npm WARN     node_modules/@directus/extensions-sdk
npm ERR! code 1
npm ERR! path /usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2
npm ERR! command failed
npm ERR! command sh -c node-pre-gyp install --fallback-to-build
npm ERR! gmake: Entering directory '/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/build'
npm ERR!   CC(target) Release/obj.target/libargon2/argon2/src/opt.o
npm ERR!   CC(target) Release/obj.target/libargon2/argon2/src/argon2.o
npm ERR!   CC(target) Release/obj.target/libargon2/argon2/src/core.o
npm ERR!   CC(target) Release/obj.target/libargon2/argon2/src/blake2/blake2b.o
npm ERR!   CC(target) Release/obj.target/libargon2/argon2/src/thread.o
npm ERR!   CC(target) Release/obj.target/libargon2/argon2/src/encoding.o
npm ERR!   AR(target) Release/obj.target/argon2.a
npm ERR!   COPY Release/argon2.a
npm ERR!   CXX(target) Release/obj.target/argon2/argon2_node.o
npm ERR! gmake: Leaving directory '/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/build'
npm ERR! Failed to execute '/usr/local/devil/node18/bin/node /usr/local/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js build --fallback-to-build --module=/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/lib/binding/napi-v3/argon2.node --module_name=argon2 --module_path=/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/lib/binding/napi-v3 --napi_version=9 --node_abi_napi=napi --napi_build_version=3 --node_napi_label=napi-v3' (1)
npm ERR! node-pre-gyp info it worked if it ends with ok
npm ERR! node-pre-gyp info using node-pre-gyp@0.17.0
npm ERR! node-pre-gyp info using node@18.19.1 | freebsd | x64
npm ERR! node-pre-gyp WARN Using needle for node-pre-gyp https download
npm ERR! node-pre-gyp info check checked for "/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/lib/binding/napi-v3/argon2.node" (not found)
npm ERR! node-pre-gyp http GET https://github.com/ranisalt/node-argon2/releases/download/v0.31.2/argon2-v0.31.2-napi-v3-freebsd-x64-unknown.tar.gz
npm ERR! node-pre-gyp http 404 https://github.com/ranisalt/node-argon2/releases/download/v0.31.2/argon2-v0.31.2-napi-v3-freebsd-x64-unknown.tar.gz
npm ERR! node-pre-gyp WARN Tried to download(404): https://github.com/ranisalt/node-argon2/releases/download/v0.31.2/argon2-v0.31.2-napi-v3-freebsd-x64-unknown.tar.gz
npm ERR! node-pre-gyp WARN Pre-built binaries not found for argon2@0.31.2 and node@18.19.1 (node-v108 ABI, unknown) (falling back to source compile with node-gyp)
npm ERR! node-pre-gyp http 404 status code downloading tarball https://github.com/ranisalt/node-argon2/releases/download/v0.31.2/argon2-v0.31.2-napi-v3-freebsd-x64-unknown.tar.gz
npm ERR! gyp info it worked if it ends with ok
npm ERR! gyp info using node-gyp@9.3.1
npm ERR! gyp info using node@18.19.1 | freebsd | x64
npm ERR! gyp info ok
npm ERR! gyp info it worked if it ends with ok
npm ERR! gyp info using node-gyp@9.3.1
npm ERR! gyp info using node@18.19.1 | freebsd | x64
npm ERR! gyp info find Python using Python version 3.10.11 found at "/usr/local/bin/python3"
npm ERR! gyp info spawn /usr/local/bin/python3
npm ERR! gyp info spawn args [
npm ERR! gyp info spawn args   '/usr/local/lib/node_modules/npm/node_modules/node-gyp/gyp/gyp_main.py',
npm ERR! gyp info spawn args   'binding.gyp',
npm ERR! gyp info spawn args   '-f',
npm ERR! gyp info spawn args   'make',
npm ERR! gyp info spawn args   '-I',
npm ERR! gyp info spawn args   '/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/build/config.gypi',
npm ERR! gyp info spawn args   '-I',
npm ERR! gyp info spawn args   '/usr/local/lib/node_modules/npm/node_modules/node-gyp/addon.gypi',
npm ERR! gyp info spawn args   '-I',
npm ERR! gyp info spawn args   '/home/MTR/.cache/node-gyp/18.19.1/include/node/common.gypi',
npm ERR! gyp info spawn args   '-Dlibrary=shared_library',
npm ERR! gyp info spawn args   '-Dvisibility=default',
npm ERR! gyp info spawn args   '-Dnode_root_dir=/home/MTR/.cache/node-gyp/18.19.1',
npm ERR! gyp info spawn args   '-Dnode_gyp_dir=/usr/local/lib/node_modules/npm/node_modules/node-gyp',
npm ERR! gyp info spawn args   '-Dnode_lib_file=/home/MTR/.cache/node-gyp/18.19.1/<(target_arch)/node.lib',
npm ERR! gyp info spawn args   '-Dmodule_root_dir=/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2',
npm ERR! gyp info spawn args   '-Dnode_engine=v8',
npm ERR! gyp info spawn args   '--depth=.',
npm ERR! gyp info spawn args   '--no-parallel',
npm ERR! gyp info spawn args   '--generator-output',
npm ERR! gyp info spawn args   'build',
npm ERR! gyp info spawn args   '-Goutput_dir=.'
npm ERR! gyp info spawn args ]
npm ERR! gyp info ok
npm ERR! gyp info it worked if it ends with ok
npm ERR! gyp info using node-gyp@9.3.1
npm ERR! gyp info using node@18.19.1 | freebsd | x64
npm ERR! gyp info spawn gmake
npm ERR! gyp info spawn args [ 'BUILDTYPE=Release', '-C', 'build' ]
npm ERR! /bin/sh: Cannot fork: Resource temporarily unavailable
npm ERR! gmake: *** [argon2.target.mk:119: Release/obj.target/argon2/argon2_node.o] Error 2
npm ERR! gyp ERR! build error
npm ERR! gyp ERR! stack Error: `gmake` failed with exit code: 2
npm ERR! gyp ERR! stack     at ChildProcess.onExit (/usr/local/lib/node_modules/npm/node_modules/node-gyp/lib/build.js:203:23)
npm ERR! gyp ERR! stack     at ChildProcess.emit (node:events:517:28)
npm ERR! gyp ERR! stack     at ChildProcess._handle.onexit (node:internal/child_process:292:12)
npm ERR! gyp ERR! System FreeBSD 13.2-RELEASE-p10
npm ERR! gyp ERR! command "/usr/local/devil/node18/bin/node" "/usr/local/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js" "build" "--fallback-to-build" "--module=/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/lib/binding/napi-v3/argon2.node" "--module_name=argon2" "--module_path=/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/lib/binding/napi-v3" "--napi_version=9" "--node_abi_napi=napi" "--napi_build_version=3" "--node_napi_label=napi-v3"
npm ERR! gyp ERR! cwd /usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2
npm ERR! gyp ERR! node -v v18.19.1
npm ERR! gyp ERR! node-gyp -v v9.3.1
npm ERR! gyp ERR! not ok
npm ERR! node-pre-gyp ERR! build error 
npm ERR! node-pre-gyp ERR! stack Error: Failed to execute '/usr/local/devil/node18/bin/node /usr/local/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js build --fallback-to-build --module=/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/lib/binding/napi-v3/argon2.node --module_name=argon2 --module_path=/usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2/lib/binding/napi-v3 --napi_version=9 --node_abi_napi=napi --napi_build_version=3 --node_napi_label=napi-v3' (1)
npm ERR! node-pre-gyp ERR! stack     at ChildProcess.<anonymous> (/usr/home/MTR/.npm-global/lib/node_modules/node-pre-gyp/lib/util/compile.js:83:29)
npm ERR! node-pre-gyp ERR! stack     at ChildProcess.emit (node:events:517:28)
npm ERR! node-pre-gyp ERR! stack     at maybeClose (node:internal/child_process:1098:16)
npm ERR! node-pre-gyp ERR! stack     at ChildProcess._handle.onexit (node:internal/child_process:303:5)
npm ERR! node-pre-gyp ERR! System FreeBSD 13.2-RELEASE-p10
npm ERR! node-pre-gyp ERR! command "/usr/local/devil/node18/bin/node" "/home/MTR/.npm-global/bin/node-pre-gyp" "install" "--fallback-to-build"
npm ERR! node-pre-gyp ERR! cwd /usr/home/MTR/domains/directus.mtr.serv00.net/public_nodejs/node_modules/argon2
npm ERR! node-pre-gyp ERR! node -v v18.19.1
npm ERR! node-pre-gyp ERR! node-pre-gyp -v v0.17.0
npm ERR! node-pre-gyp ERR! not ok

npm ERR! A complete log of this run can be found in: /home/MTR/.npm/_logs/2024-03-02T10_44_47_496Z-debug-0.log

admin

https://docs.serv00.com/Binexec/

"If in the meantime the session of connecting via SSH was active you should disconnect and reconnect your SSH session."

MTR

I also did but the issue with Directus is still there.
I know the Binexec worked because before enabling it, I tried "npx cowsay test" and I had the permission issue also. But after enabling Binexec, cowsay worked but not Directus. That's why I'm clueless.

admin

MTR To get permission for executing binaries you need to activate binexcec and reconnect your SSH session. If you installed any software without execution permissions it may not work correctly without reinstalling it.